Fitness data for PS417_21335 in Pseudomonas simiae WCS417

sugar ABC transporter substrate-binding protein
SEED: L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2)
KEGG: L-arabinose transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source L-Arabinose (C) -1.0 -4.8 compare
carbon source L-Arabinose (C) -1.0 -3.5 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.8 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.6 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.6 -1.4 compare
phage JP1 MOI 1 -0.5 -1.7 compare
stress methylglyoxal 0.032 vol% -0.5 -1.7 compare
solid stress Fraxetin 2 mM; solid stress -0.5 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.6 compare
liquid stress Fraxetin 2 mM; liquid stress -0.4 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.4 +0.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +1.2 compare
stress LB_noSalt with Chloride 500 mM +0.4 +1.2 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.5 +2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.6 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +1.6 compare
stress LB_noSalt with Chloride 1100 mM +0.7 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.1 +4.6 compare