Fitness data for PS417_21330 in Pseudomonas simiae WCS417

L-arabinose transporter ATP-binding protein
SEED: L-arabinose transport ATP-binding protein AraG (TC 3.A.1.2.2)
KEGG: L-arabinose transport system ATP-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source Carbon source L-Citrulline 5 mM -0.9 -3.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.8 -2.0 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -0.7 -1.8 compare
soil soil sample 7; outgrowth in LB -0.6 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -2.1 compare
phage JP1 MOI 10 -0.6 -1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -1.6 compare
carbon source D-Glucosamine Hydrochloride (C) -0.5 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +1.5 compare
phage P. simiae Grant Run MOI 0.1 +0.5 +1.3 compare
carbon source Trisodium citrate (C) +0.5 +1.8 compare
carbon source L-Valine (C) +0.5 +1.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +2.0 compare
carbon source D-Galactose (C) +0.6 +3.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.7 +2.5 compare
phage P. simiae OR Antrim MOI 0.1 +0.7 +3.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.0 +2.6 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.2 +1.5 compare