Fitness data for PS417_21325 in Pseudomonas simiae WCS417

arabinose ABC transporter permease
SEED: L-arabinose transport system permease protein (TC 3.A.1.2.2)
KEGG: L-arabinose transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
agar plate interaction control Taped volatile agar plate with no fungus -1.2 -2.1 compare
soil soil sample 7; outgrowth in LB -1.0 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.8 -2.4 compare
seeds Growth on radish seeds for 72 hours -0.8 -2.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.7 -2.7 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -0.7 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.7 -2.2 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.6 -1.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.6 +1.2 compare
motility inner cut, LB soft agar motility assay +0.7 +1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +1.5 compare
phage moi 100 Time6-phageFRS +0.7 +3.0 compare
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.7 +1.8 compare
carbon source Deoxyribonucleic from herring sperm 5 mg/mL (C) +0.7 +2.6 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.7 +1.8 compare
stress R2A with Fusaric 120 ug/mL +0.8 +2.4 compare
soil soil sample 3; outgrowth in LB +0.8 +1.9 compare
phage JP1 MOI 1 +0.8 +1.1 compare
soil soil sample 6; outgrowth in LB +0.8 +1.7 compare
carbon source L-Valine (C) +1.8 +2.7 compare