Fitness data for PS417_21280 in Pseudomonas simiae WCS417

membrane protein
SEED: OmpA family protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
stress Doxycycline hyclate 0.001 mg/ml -1.1 -3.4 compare
motility outer cut, LB soft agar motility assay -0.9 -4.3 compare
stress Tetracycline 0.001 mg/ml -0.8 -3.4 compare
phage P. simiae OR1 MOI 0.1 -0.7 -2.3 compare
motility outer cut, LB soft agar motility assay -0.7 -3.0 compare
motility outer cut, LB soft agar motility assay -0.6 -3.0 compare
stress methylglyoxal 0.032 vol% -0.6 -1.9 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -0.6 -2.3 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x -0.6 -2.7 compare
motility inner cut, LB soft agar motility assay -0.5 -2.1 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -0.5 -2.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +1.1 compare
phage JP1 MOI 10 +0.5 +1.7 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.6 +1.8 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.6 +1.9 compare
phage JP1 MOI 1 +0.6 +1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +1.8 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.7 +2.2 compare
stress L-Lysine 60 mM +0.8 +3.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +1.7 compare