Fitness data for PS417_21215 in Pseudomonas simiae WCS417

3-hydroxyacyl-CoA dehydrogenase
SEED: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
KEGG: 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
soil soil sample 5; outgrowth in LB -0.9 -3.4 compare
phage P. simiae Grant Run MOI 10 -0.5 -2.2 compare
phage JP1 MOI 10 -0.5 -2.1 compare
phage JP1 MOI 1 -0.5 -1.8 compare
phage P. simiae ORA MOI 0.1 -0.4 -2.1 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -0.4 -1.8 compare
soil soil sample 3; outgrowth in LB -0.4 -1.6 compare
phage P. simiae ORA MOI 0.1 -0.3 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.3 +1.6 compare
motility inner cut, LB soft agar motility assay +0.3 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.4 +1.9 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.4 +2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.4 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +2.0 compare
soil soil sample 8; outgrowth in LB +0.5 +1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +2.2 compare
soil soil sample 2; outgrowth in LB +0.5 +2.0 compare
seeds Growth on radish seeds for 72 hours +0.6 +3.2 compare