Fitness data for PS417_21140 in Pseudomonas simiae WCS417

LysR family transcriptional regulator
SEED: Transcriptional regulator, LysR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
seeds Growth on radish seeds for 72 hours -1.3 -2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.2 -1.4 compare
carbon source L-Valine (C) -0.9 -1.7 compare
carbon source RCH2_defined_glucose with MS_media 1x -0.9 -3.5 compare
stress methylglyoxal 0.032 vol% -0.9 -1.6 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.8 -2.4 compare
exudates RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 1x -0.8 -2.9 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.7 -2.4 compare
carbon source Carbon source L-Ornithine 5 mM -0.7 -2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -2.1 compare
carbon source RCH2_defined_glucose with MS_media 1x -0.7 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.7 -2.1 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -0.7 -1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.7 +1.4 compare
liquid stress Fraxetin 0.5 mM; liquid stress +0.7 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.7 +1.0 compare
soil soil sample 7; outgrowth in LB +0.7 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.8 +1.3 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.8 +1.7 compare