Fitness data for PS417_20745 in Pseudomonas simiae WCS417

twitching motility protein PilT
SEED: VapC toxin protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.7 -3.0 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.6 -2.5 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.6 -1.7 compare
carbon source L-Valine (C) -0.5 -1.6 compare
motility inner cut, LB soft agar motility assay -0.5 -2.3 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.5 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -1.8 compare
exudates RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 1x -0.4 -2.4 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x -0.4 -2.4 compare
soil soil sample 8; outgrowth in LB +0.4 +1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.4 +1.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.4 +1.4 compare
phage P. simiae Grant Run MOI 0.1 +0.4 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.2 compare
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.4 +2.1 compare
carbon source 2-Deoxy-D-Ribose (C) +0.4 +1.9 compare
soil soil sample 5; outgrowth in LB +0.5 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.6 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.7 +1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +3.0 compare