Fitness data for PS417_19950 in Pseudomonas simiae WCS417

ATP-dependent DNA helicase RecQ
SEED: ATP-dependent DNA helicase RecQ
KEGG: ATP-dependent DNA helicase RecQ

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
stress Cisplatin 0.01 mg/ml -2.0 -5.4 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -0.6 -2.7 compare
root root sample 6; outgrowth in LB -0.5 -1.6 compare
phage JP1 MOI 1 -0.5 -1.8 compare
soil soil sample 2; outgrowth in LB -0.5 -1.8 compare
phage P. simiae ORA MOI 0.1 -0.5 -1.5 compare
no phage control Time6-nophage -0.5 -2.2 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -0.5 -1.7 compare
soil soil sample 5; outgrowth in LB -0.5 -1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +2.0 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.5 +1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.5 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.4 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.7 +2.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +2.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +3.1 compare
seeds Growth on radish seeds for 72 hours +0.8 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.0 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.0 +2.2 compare