Fitness data for PS417_19910 in Pseudomonas simiae WCS417

aromatic amino acid aminotransferase
SEED: Aspartate aminotransferase (EC 2.6.1.1)
KEGG: aromatic-amino-acid transaminase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -2.4 compare
seeds Growth on radish seeds for 72 hours -0.9 -2.0 compare
phage P. simiae Grant Run MOI 0.1 -0.8 -2.2 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.8 -2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -1.9 compare
soil soil sample 6; outgrowth in LB -0.7 -1.2 compare
root root sample 6; outgrowth in LB -0.6 -1.0 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x -0.6 -1.9 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.6 +1.9 compare
soil soil sample 7; outgrowth in LB +0.6 +1.2 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +2.2 compare
stress 1-ethyl-3-methylimidazolium acetate 35 mM +0.7 +2.0 compare
soil soil sample 8; outgrowth in LB +0.7 +2.6 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.7 +1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.8 +3.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.9 +2.5 compare
carbon source 2'-Deoxyinosine 5 mM (C) +0.9 +2.0 compare
phage P. simiae Grant Run MOI 10 +1.0 +1.7 compare