Fitness data for PS417_19475 in Pseudomonas simiae WCS417

pseudouridine synthase
SEED: Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)
KEGG: ribosomal large subunit pseudouridine synthase A

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
stress Gentamicin 0.008 mg/ml -1.3 -3.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -3.1 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.9 -3.9 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.9 -4.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -3.1 compare
stress methylglyoxal 0.032 vol% -0.8 -2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.8 -3.7 compare
supernatant control Vogels_fungal_media 0.1X -0.8 -2.7 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.8 -3.7 compare
phage P. simiae Grant Run MOI 10 -0.8 -3.6 compare
carbon source Carbon source L-Ornithine 10 mM -0.8 -4.3 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.7 -2.2 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.7 -2.7 compare
carbon source Carbon source L-Ornithine 10 mM -0.7 -4.5 compare
stress Doxycycline hyclate 0.001 mg/ml -0.6 -2.2 compare
no stress control on plate growth on LB_noSalt plate -0.6 -3.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -0.6 -3.2 compare
stress R2A with Fusaric 120 ug/mL -0.6 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.9 +2.7 compare
soil soil sample 5; outgrowth in LB +0.9 +2.3 compare