Fitness data for PS417_19420 in Pseudomonas simiae WCS417

OHCU decarboxylase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
carbon source Inosine (C) -4.7 -5.9 compare
carbon source Inosine (C) -4.2 -5.0 compare
nitrogen source Inosine (N) -3.0 -7.8 compare
carbon source Deoxyribonucleic from herring sperm 5 mg/mL (C) -2.8 -6.6 compare
carbon source 2'-Deoxyinosine 5 mM (C) -2.4 -3.6 compare
carbon source 2'-Deoxyinosine 5 mM (C) -2.3 -3.1 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -2.2 -6.5 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -2.2 -6.8 compare
carbon source Deoxyribonucleic from herring sperm 5 mg/mL (C) -2.1 -5.2 compare
root root sample 6; outgrowth in LB -1.4 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.3 -2.8 compare
seeds Growth on radish seeds for 24 hours -1.3 -3.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.2 -2.6 compare
phage JP1 MOI 10 -1.0 -2.0 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -1.0 -1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.9 -2.2 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.8 -2.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.9 +1.8 compare
phage P. simiae OR Antrim MOI 10 +1.0 +3.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.7 +1.2 compare