Fitness data for PS417_18950 in Pseudomonas simiae WCS417

3-dehydroquinate dehydratase
SEED: 3-dehydroquinate dehydratase II (EC 4.2.1.10)
KEGG: 3-dehydroquinate dehydratase II

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -1.8 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -0.9 -2.8 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.7 -1.5 compare
motility inner cut, LB soft agar motility assay -0.6 -2.6 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -0.6 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -2.4 compare
carbon source Deoxyribonucleic from herring sperm 5 mg/mL (C) -0.6 -2.3 compare
stress methylglyoxal 0.032 vol% -0.6 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -1.2 compare
carbon source Gly-Glu (C) -0.5 -2.0 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.5 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.5 -1.6 compare
phage P. simiae OR1 MOI 0.1 -0.5 -1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.7 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.5 +2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.6 +2.7 compare
phage P. simiae Grant Run MOI 0.1 +0.6 +1.6 compare
seeds Growth on radish seeds for 72 hours +0.9 +2.0 compare