Fitness data for PS417_18945 in Pseudomonas simiae WCS417

endoribonuclease
SEED: Bona fide RidA/YjgF/TdcF/RutC subgroup

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


Add gene:

Or see all 552 experiments or choose conditions

group condition fitness t score  
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -0.8 -2.5 compare
stress LB_noSalt with Chloride 1100 mM -0.8 -2.7 compare
liquid stress Scopoletin 3 mM; liquid stress -0.7 -1.4 compare
phage JP1 MOI 10 -0.6 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -1.5 compare
phage moi 100 Time6-phageFRS -0.6 -2.7 compare
soil soil sample 3; outgrowth in LB +0.6 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +0.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +1.9 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.7 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.7 +1.2 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.7 +1.8 compare
root root sample 6; outgrowth in LB +0.7 +1.2 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.8 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 +1.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.9 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.0 +1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.0 +1.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.0 +1.1 compare