Fitness data for PS417_18935 in Pseudomonas simiae WCS417

amino acid ABC transporter ATPase
SEED: FIG00731493: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -2.2 compare
phage P. simiae ORA MOI 0.1 -0.5 -2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -1.8 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -0.4 -2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -1.5 compare
stress LB_noSalt with Chloride 1100 mM -0.4 -2.2 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.4 -1.7 compare
phage P. simiae OR1 MOI 0.1 -0.4 -1.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.4 +2.0 compare
stress Gentamicin 0.008 mg/ml +0.4 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +2.9 compare
soil soil sample 6; outgrowth in LB +0.4 +1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +2.1 compare
stress methylglyoxal 0.032 vol% +0.5 +1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.5 compare
carbon source L-Valine (C) +0.8 +2.2 compare