Fitness data for PS417_18885 in Pseudomonas simiae WCS417

GntR family transcriptional regulator
SEED: Predicted D-glucarate or D-galactorate regulator, GntR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.2)


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group condition fitness t score  
phage JP1 MOI 0.1 -2.4 -2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.9 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.5 -1.8 compare
nophagecontrol Only library -1.5 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.5 -2.2 compare
stress Gentamicin 0.008 mg/ml -1.4 -1.8 compare
motility inner cut, LB soft agar motility assay -1.4 -2.1 compare
motility outer cut, LB soft agar motility assay -1.3 -2.1 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.2 -1.7 compare
carbon source L-Valine (C) -1.2 -1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.2 -1.8 compare
carbon source octanoate (C) -1.2 -1.9 compare
phage JP1 MOI 10 -1.2 -1.3 compare
seeds Growth on radish seeds for 72 hours -1.2 -1.5 compare
phage P. simiae OR Antrim MOI 1 -1.2 -1.5 compare
carbon source D-Mannose (C) +1.2 +4.1 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) +1.3 +3.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.4 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.5 +2.9 compare
carbon source D-Mannose (C) +1.8 +6.7 compare