Fitness data for PS417_18475 in Pseudomonas simiae WCS417

Pyrrolidone-carboxylate peptidase
SEED: Pyrrolidone-carboxylate peptidase (EC 3.4.19.3)
KEGG: pyroglutamyl-peptidase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
stress Doxycycline hyclate 0.001 mg/ml -1.2 -2.4 compare
phage JP1 MOI 10 -1.0 -1.7 compare
phage JP1 MOI 1 -0.8 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Threonine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.8 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.7 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.7 -1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.7 -1.8 compare
carbon source a-Ketoglutaric (C) +0.7 +2.1 compare
carbon source D-Trehalose (C) +0.7 +2.4 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB +0.7 +1.2 compare
carbon source Fumarate (C) +0.7 +2.3 compare
carbon source succinate (C) +0.7 +2.2 compare
carbon source D-Galacturonic Acid (C) +0.7 +1.4 compare
root root sample 6; outgrowth in LB +0.7 +1.4 compare
carbon source pyruvate (C) +0.8 +2.4 compare
carbon source Ethanol (C) +0.8 +1.8 compare
carbon source Trisodium citrate (C) +0.8 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.9 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +1.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.3 +0.9 compare