Fitness data for PS417_01815 in Pseudomonas simiae WCS417

peptide ABC transporter ATP-binding protein
SEED: Glutamate Aspartate transport ATP-binding protein GltL (TC 3.A.1.3.4)
KEGG: putative glutamine transport system ATP-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
seeds Growth on radish seeds for 72 hours -1.1 -1.7 compare
root root sample 6; outgrowth in LB -1.0 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -1.7 compare
supernatant control Vogels_fungal_media 0.1X -0.9 -1.4 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.8 -1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.8 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.8 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -1.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.7 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -1.2 compare
carbon source Carbon source D-Mannitol 5 mM +0.7 +1.4 compare
no stress control TSB 0.5x with Dimethyl Sulfoxide 0.5 vol%; timepoint 2 +0.7 +0.9 compare
solid stress Scopoletin 1 mM; solid stress +0.7 +1.3 compare
solid stress 80% Methanol 0.5 mM; solid stress +0.8 +1.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Phenylalanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.8 +1.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.8 +1.7 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.8 +1.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.9 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.2 +4.4 compare