Fitness data for PS417_18185 in Pseudomonas simiae WCS417

5-carboxymethyl-2-hydroxymuconate isomerase
SEED: Putative fumarylacetoacetate (FAA) hydrolase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -2.3 compare
soil soil sample 5; outgrowth in LB -0.8 -1.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.7 -1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -3.2 compare
motility inner cut, LB soft agar motility assay -0.7 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days -0.6 -1.7 compare
carbon source L-Valine (C) -0.6 -1.6 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.6 -1.8 compare
stress 6-methoxy-2(3H)-benzoxazolone 1.2 mM -0.6 -2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -1.4 compare
no stress control on plate growth on LB_noSalt plate -0.5 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.3 compare
carbon source Putrescine (C) +0.5 +2.5 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.6 +1.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +1.8 compare
phage JP1 MOI 0.1 +0.7 +2.1 compare
phage JP1 MOI 10 +0.7 +1.6 compare
phage P. simiae ORA MOI 0.1 +0.8 +3.5 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.0 +2.0 compare