Fitness data for PS417_18110 in Pseudomonas simiae WCS417

TonB-dependent receptor
SEED: TonB-dependent ferric achromobactin receptor protein
KEGG: iron complex outermembrane recepter protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.5 -2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -0.5 -2.4 compare
phage JP1 MOI 10 -0.4 -1.6 compare
phage moi 100 Time6-phageFRS -0.4 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -1.9 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.4 -1.6 compare
ecofab LB 0.5x in EcoFAB_3.5mL -0.4 -2.2 compare
soil soil sample 3; outgrowth in LB +0.3 +1.4 compare
phage P. simiae OR Antrim MOI 0.1 +0.3 +1.7 compare
solid stress 80% Methanol 3 mM; solid stress +0.4 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.4 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.4 +1.5 compare
phage P. simiae Grant Run MOI 10 +0.4 +2.2 compare
solid stress Fraxetin 2 mM; solid stress +0.4 +2.9 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +2.1 compare
rhizosphere rhizosphere sample 8; outgrowth in LB +0.5 +2.4 compare
seeds Growth on radish seeds for 72 hours +0.6 +1.8 compare
stress Gentamicin 0.008 mg/ml +0.6 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.7 +1.5 compare