Fitness data for PS417_17940 in Pseudomonas simiae WCS417

sorbosone dehydrogenase
SEED: L-sorbosone dehydrogenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -2.2 compare
seeds Growth on radish seeds for 72 hours -0.5 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.5 compare
phage JP1 MOI 0.1 -0.4 -2.3 compare
stress methylglyoxal 0.032 vol% -0.4 -1.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.4 -1.4 compare
stress Doxycycline hyclate 0.001 mg/ml -0.4 -1.4 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.4 -1.1 compare
nitrogen source Ammonium chloride (N) +0.4 +2.3 compare
root root sample 6; outgrowth in LB +0.4 +1.6 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) +0.4 +2.3 compare
phage P. simiae ORA MOI 10 +0.4 +2.1 compare
phage P. simiae OR Antrim MOI 0.1 +0.4 +2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +1.5 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +0.5 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +2.2 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.5 +1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.7 +1.4 compare