Fitness data for PS417_17715 in Pseudomonas simiae WCS417

actin
SEED: Xylulose kinase (EC 2.7.1.17)
KEGG: xylulokinase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
phage P. simiae OR1 MOI 0.1 -0.8 -3.2 compare
soil soil sample 5; outgrowth in LB -0.5 -1.9 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -0.5 -2.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -2.6 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.4 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.4 -1.9 compare
motility outer cut, LB soft agar motility assay -0.4 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.4 -1.7 compare
carbon source L-Valine (C) -0.4 -1.6 compare
motility inner cut, LB soft agar motility assay -0.4 -1.6 compare
phage P. simiae OR Antrim MOI 0.1 -0.4 -1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +0.4 +1.7 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.6 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.4 +1.2 compare
nitrogen source Adenine (N) +0.4 +1.8 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.4 +2.1 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) +0.5 +2.3 compare
carbon source Xylitol (C) +0.6 +5.0 compare
carbon source Xylitol (C) +0.8 +4.3 compare