Fitness data for PS417_17590 in Pseudomonas simiae WCS417

ABC transporter substrate-binding protein
SEED: Lysine-arginine-ornithine-binding periplasmic protein precursor (TC 3.A.1.3.1)
KEGG: lysine/arginine/ornithine transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.3)


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group condition fitness t score  
carbon source Carbon source L-Ornithine 10 mM -5.2 -3.3 compare
carbon source Carbon source L-Ornithine 10 mM -3.8 -3.6 compare
carbon source Carbon source L-Citrulline 5 mM -2.7 -2.3 compare
carbon source Carbon source L-Ornithine 5 mM -2.7 -2.8 compare
phage P. simiae OR1 MOI 0.1 -2.2 -1.7 compare
carbon source Carbon source L-Citrulline 10 mM -2.2 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.1 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -2.0 -1.7 compare
phage P. simiae ORA MOI 0.1 -1.7 -1.7 compare
soil soil sample 7; outgrowth in LB -1.5 -1.5 compare
carbon source Carbon source L-Ornithine 5 mM -1.5 -1.7 compare
carbon source Carbon source L-Citrulline 10 mM -1.4 -1.9 compare
carbon source Carbon source L-Citrulline 5 mM -1.3 -1.6 compare
phage JP1 MOI 10 -1.3 -1.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.3 +3.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +1.4 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.6 +2.4 compare
carbon source L-Citrulline (C) +1.7 +5.8 compare
carbon source L-Citrulline (C) +1.9 +6.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +2.0 +1.9 compare