Fitness data for PS417_17400 in Pseudomonas simiae WCS417

TetR family transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.3 -2.3 compare
phage Wcs_1 -1.3 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -2.0 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -0.7 -2.9 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -0.7 -1.9 compare
stress Tetracycline 0.001 mg/ml -0.7 -3.1 compare
soil soil sample 3; outgrowth in LB -0.7 -1.0 compare
supernatant control Vogels_fungal_media; pH 5.5 -0.7 -3.1 compare
solid stress Fraxetin 3 mM; solid stress -0.6 -1.7 compare
liquid stress Fraxetin 2 mM; liquid stress -0.6 -2.7 compare
exudates RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 1x -0.6 -2.8 compare
phage moi 100 Time6-phageFRS -0.6 -2.2 compare
liquid stress 80% Methanol 3 mM; liquid stress -0.6 -2.1 compare
stress 2-Furfuraldehyde 0.06 vol% -0.6 -3.3 compare
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.7 +2.4 compare
seeds Growth on radish seeds for 72 hours +0.7 +2.3 compare
carbon source octanoate (C) +1.0 +3.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.0 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.1 +1.4 compare