Fitness data for PS417_17380 in Pseudomonas simiae WCS417

membrane protein
SEED: TRAP-type C4-dicarboxylate transport system, large permease component

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.3 -1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.0 -2.0 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -1.0 -2.6 compare
supernatant control Vogels_fungal_media 0.1X -0.9 -1.1 compare
soil soil sample 8; outgrowth in LB -0.8 -1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.8 -2.0 compare
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.8 -1.4 compare
phage P. simiae ORA MOI 10 -0.7 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -2.7 compare
solid stress Fraxetin 1 mM; solid stress -0.7 -1.5 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.7 +1.5 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x +0.7 +2.3 compare
phage P. simiae OR Antrim MOI 1 +0.8 +1.8 compare
phage JP1 MOI 0.1 +0.8 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.8 +1.8 compare
carbon source L-Valine (C) +0.9 +1.5 compare
seeds Growth on radish seeds for 72 hours +0.9 +1.8 compare
stress methylglyoxal 0.032 vol% +1.0 +2.5 compare