Fitness data for PS417_17370 in Pseudomonas simiae WCS417

C4-dicarboxylate ABC transporter
SEED: TRAP-type C4-dicarboxylate transport system, periplasmic component

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source 2'-Deoxyinosine 5 mM (C) -1.0 -1.7 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -0.7 -3.0 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.6 -1.7 compare
phage JP1 MOI 10 -0.6 -2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -1.5 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.5 -1.4 compare
carbon source Deoxyribonucleic from herring sperm 5 mg/mL (C) -0.5 -1.4 compare
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -0.5 -2.2 compare
solid stress Fraxetin 3 mM; solid stress -0.4 -2.0 compare
motility inner cut, LB soft agar motility assay -0.4 -2.0 compare
carbon source RCH2_defined_glucose with MS_media 1x -0.4 -2.7 compare
solid stress 80% Methanol 2 mM; solid stress +0.4 +2.5 compare
solid stress Scopoletin 2 mM; solid stress +0.5 +2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.6 +1.3 compare
seeds Growth on radish seeds for 72 hours +0.7 +3.1 compare
phage P. simiae ORA MOI 0.1 +0.7 +2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.9 +2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.1 +1.4 compare