Fitness data for PS417_17315 in Pseudomonas simiae WCS417

nitrate reductase
SEED: Possible pyrimidine permease in reductive pathway
KEGG: nucleobase:cation symporter-1, NCS1 family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
nitrogen source Cytidine (N) -0.8 -4.4 compare
nitrogen source Uridine (N) -0.7 -4.0 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x -0.5 -3.0 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.5 -2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -2.0 compare
no phage control Time6-nophage -0.4 -2.0 compare
carbon source L-Valine (C) -0.4 -1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -1.5 compare
carbon source L-Glutamine (C) -0.4 -2.6 compare
phage P. simiae OR Antrim MOI 10 -0.4 -1.8 compare
carbon source m-Inositol (C) -0.4 -2.4 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -0.3 -2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X -0.3 -1.8 compare
stress Doxycycline hyclate 0.001 mg/ml -0.3 -1.5 compare
soil soil sample 7; outgrowth in LB +0.3 +1.4 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.4 +1.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.4 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.5 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +1.2 compare
seeds Growth on radish seeds for 72 hours +0.6 +2.5 compare