Fitness data for PS417_01720 in Pseudomonas simiae WCS417

Urocanate hydratase (EC 4.2.1.49) (from data)
Original annotation: urocanate hydratase
SEED: Urocanate hydratase (EC 4.2.1.49)
KEGG: urocanate hydratase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source L-Histidine (C) -4.2 -13.6 compare
carbon source L-Histidine (C) -3.1 -8.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.5 -8.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.0 -4.2 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.7 -2.6 compare
seeds Growth on radish seeds for 24 hours -0.7 -3.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.7 -3.3 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -3.0 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x -0.6 -3.1 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.6 -3.1 compare
solid stress 80% Methanol 3 mM; solid stress -0.5 -3.0 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.5 -2.4 compare
phage Wcs_0.1 -0.5 -2.0 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.4 -2.0 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.4 -2.0 compare
phage Wcs_1 +0.4 +1.8 compare
phage P. simiae ORA MOI 0.1 +0.5 +1.9 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +1.5 compare