Fitness data for PS417_17195 in Pseudomonas simiae WCS417

pyruvate dehydrogenase
SEED: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
KEGG: pyruvate dehydrogenase E1 component

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.3 -2.4 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.3 -2.0 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -0.3 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.2 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.2 +1.7 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 +1.6 compare
phage P. simiae ORA MOI 0.1 +0.3 +1.8 compare
soil soil sample 3; outgrowth in LB +0.3 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.3 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.9 compare
seeds Growth on radish seeds for 72 hours +0.3 +2.0 compare
phage P. simiae ORA MOI 10 +0.3 +2.3 compare
soil soil sample 2; outgrowth in LB +0.3 +2.1 compare
phage JP1 MOI 10 +0.3 +2.0 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.3 +1.8 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.3 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +2.4 compare
stress methylglyoxal 0.032 vol% +0.5 +2.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.6 +2.2 compare