Fitness data for PS417_01705 in Pseudomonas simiae WCS417

Formiminoglutamic iminohydrolase (EC 3.5.3.13) (from data)
Original annotation: N-formimino-L-glutamate deiminase
SEED: Formiminoglutamic iminohydrolase (EC 3.5.3.13)
KEGG: formimidoylglutamate deiminase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
carbon source L-Histidine (C) -5.6 -10.8 compare
carbon source L-Histidine (C) -4.8 -9.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -3.5 -6.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -2.1 -7.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.9 -8.1 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x -1.8 -6.8 compare
carbon source L-Valine (C) -1.7 -5.3 compare
soil soil sample 3; outgrowth in LB -1.3 -4.9 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -1.3 -7.3 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x -1.2 -6.1 compare
solid stress Fraxetin 3 mM; solid stress -0.8 -4.4 compare
stress methylglyoxal 0.032 vol% -0.7 -2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +4.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.9 +3.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.9 +6.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.0 +5.4 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x +1.2 +6.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.3 +3.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.4 +8.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.5 +9.0 compare