Fitness data for PS417_01680 in Pseudomonas simiae WCS417

membrane protein
SEED: FIG00955932: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -2.6 compare
phage P. simiae OR1 MOI 0.1 -0.4 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.3 -1.9 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.3 -1.4 compare
motility inner cut, LB soft agar motility assay -0.3 -1.9 compare
phage P. simiae OR Antrim MOI 0.1 -0.2 -1.3 compare
phage P. simiae Grant Run MOI 10 -0.2 -1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.2 -1.4 compare
solid stress Fraxetin 0.5 mM; solid stress -0.2 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.2 +1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.3 +1.5 compare
stress Thallium(I) acetate 0.0625 mg/ml +0.3 +2.0 compare
stress Choline Lysine 25 mM +0.3 +2.0 compare
temperature LB 42C +0.3 +2.3 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 +1.2 compare
seeds Growth on radish seeds for 72 hours +0.3 +1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.3 +1.8 compare
carbon source 2'-Deoxyinosine 5 mM (C) +0.3 +1.9 compare
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.4 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +2.2 compare