Fitness data for PS417_00170 in Pseudomonas simiae WCS417

glucarate transporter
SEED: D-galactonate transporter
KEGG: MFS transporter, ACS family, D-galactonate transporter

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source D-Galactose (C) -0.9 -7.0 compare
carbon source D-Galactose (C) -0.8 -5.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -2.6 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.4 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.3 -2.0 compare
stress L-Lysine 60 mM -0.3 -2.3 compare
motility outer cut, LB soft agar motility assay -0.3 -1.6 compare
no phage control Time6-nophage -0.3 -1.7 compare
phage JP1 MOI 10 -0.3 -1.5 compare
phage P. simiae OR Antrim MOI 1 -0.3 -1.4 compare
carbon source Carbon source L-Ornithine 5 mM -0.3 -1.9 compare
soil soil sample 4; outgrowth in LB -0.3 -1.6 compare
phage JP1 MOI 0.1 +0.3 +1.7 compare
stress Neomycin 0.04 mg/ml +0.3 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.3 +1.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.3 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +1.8 compare