Fitness data for PS417_16760 in Pseudomonas simiae WCS417

membrane protein
SEED: Outer membrane efflux family protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.2 -2.2 compare
seeds Growth on radish seeds for 72 hours -1.2 -1.7 compare
motility inner cut, LB soft agar motility assay -0.9 -2.4 compare
seeds Growth on radish seeds for 72 hours -0.9 -1.7 compare
no phage control Time6-nophage -0.8 -2.2 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.8 -1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -1.9 compare
solid stress Fraxetin 2 mM; solid stress -0.7 -2.6 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -0.7 -2.8 compare
root root sample 6; outgrowth in LB -0.7 -0.7 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.7 -1.2 compare
liquid stress Fraxetin 3 mM; liquid stress -0.7 -2.1 compare
solid stress Scopoletin 1 mM; solid stress -0.7 -2.0 compare
liquid stress Fraxetin 2 mM; liquid stress -0.6 -2.8 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -0.6 -2.2 compare
carbon source Carbon source L-Ornithine 10 mM -0.6 -2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +1.8 compare
soil soil sample 6; outgrowth in LB +0.7 +2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +2.2 compare