Fitness data for PS417_16720 in Pseudomonas simiae WCS417

membrane protein
SEED: Putative signal peptide protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.3)


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group condition fitness t score  
soil soil sample 7; outgrowth in LB -3.6 -1.1 compare
soil soil sample 4; outgrowth in LB -2.4 -1.2 compare
carbon source 2'-Deoxyinosine 5 mM (C) -2.3 -1.0 compare
supernatant control Vogels_fungal_media 0.1X -2.2 -1.2 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -2.2 -0.8 compare
soil soil sample 5; outgrowth in LB -1.9 -0.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.8 -0.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.8 -1.1 compare
supernatant control Vogels_fungal_media; pH 5.5 -1.7 -1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.6 -1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.5 -0.8 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.5 -1.2 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -1.5 -1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Threonine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.5 -1.4 compare
stress Gentamicin 0.008 mg/ml -1.4 -0.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.4 -0.8 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +1.3 +1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +1.9 +3.5 compare
seeds Growth on radish seeds for 72 hours +1.9 +1.9 compare
carbon source L-Valine (C) +2.0 +1.8 compare