Fitness data for PS417_01650 in Pseudomonas simiae WCS417

chorismate mutase
SEED: Periplasmic chorismate mutase I precursor (EC 5.4.99.5)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
agar plate interaction control Taped volatile agar plate with no fungus -1.2 -3.2 compare
phage JP1 MOI 1 -0.7 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -2.2 compare
root root sample 6; outgrowth in LB -0.6 -2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -2.2 compare
soil soil sample 6; outgrowth in LB -0.5 -2.2 compare
solid stress Fraxetin 2 mM; solid stress -0.5 -1.6 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -0.4 -1.9 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.4 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.4 +1.2 compare
phage P. simiae OR1 MOI 0.1 +0.5 +1.2 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.6 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.6 +1.4 compare
soil soil sample 2; outgrowth in LB +0.6 +2.3 compare
solid stress Fraxetin 3 mM; solid stress +0.6 +2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +1.7 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.7 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.9 +1.8 compare