Fitness data for PS417_16535 in Pseudomonas simiae WCS417

NUDIX hydrolase
SEED: Nudix-like NDP and NTP phosphohydrolase YmfB

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
carbon source L-Valine (C) -2.1 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.4 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.4 -2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.2 -1.5 compare
stress Gentamicin 0.008 mg/ml -1.1 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.1 -2.5 compare
seeds Growth on radish seeds for 72 hours -1.0 -1.7 compare
phage P. simiae Grant Run MOI 0.1 -0.9 -1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.9 -1.4 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -0.9 -1.7 compare
motility outer cut, LB soft agar motility assay -0.8 -2.1 compare
stress 2-Furfuraldehyde 0.03 vol% -0.8 -3.3 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.8 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.9 +1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.9 +2.0 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.9 +2.3 compare
phage P. simiae ORA MOI 10 +1.1 +2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.5 +3.7 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.5 +1.7 compare