Fitness data for PS417_16525 in Pseudomonas simiae WCS417

isocitrate dehydrogenase
SEED: Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
KEGG: isocitrate dehydrogenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source octanoate (C) -1.2 -6.9 compare
carbon source octanoate (C) -1.0 -6.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.6 -3.5 compare
carbon source Gly-Glu (C) -0.5 -3.9 compare
carbon source Gly-Glu (C) -0.5 -3.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -2.3 compare
seeds Growth on radish seeds for 72 hours -0.4 -2.4 compare
soil soil sample 2; outgrowth in LB -0.4 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.4 -3.1 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -1.9 compare
soil soil sample 7; outgrowth in LB -0.4 -1.7 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -0.4 -2.1 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -0.4 -2.0 compare
soil soil sample 4; outgrowth in LB -0.4 -2.0 compare
soil soil sample 6; outgrowth in LB -0.4 -2.0 compare
carbon source m-Inositol (C) +0.4 +2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.4 +2.2 compare