Fitness data for PS417_16400 in Pseudomonas simiae WCS417

NAD(P)H-quinone oxidoreductase
SEED: Flavoprotein WrbA
KEGG: Trp repressor binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -6.5 -2.1 compare
phage Wcs_1 -2.2 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.0 -1.9 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x -1.6 -2.0 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -1.4 -2.1 compare
phage P. simiae OR Antrim MOI 0.1 -1.3 -1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.3 -2.0 compare
carbon source acetate (C) -1.2 -2.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.1 -1.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -0.8 compare
stress Gentamicin 0.008 mg/ml -1.0 -0.8 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -1.0 -2.0 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +1.0 +2.6 compare
phage P. simiae ORA MOI 10 +1.0 +2.1 compare
phage P. simiae Grant Run MOI 0.1 +1.0 +1.6 compare
phage P. simiae Grant Run MOI 10 +1.1 +1.4 compare
carbon source Carbon source L-Citrulline 5 mM +1.2 +3.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.3 +2.5 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +1.5 +2.0 compare
seeds Growth on radish seeds for 72 hours +1.5 +2.6 compare