Fitness data for PS417_00165 in Pseudomonas simiae WCS417

galactonate dehydratase
SEED: Galactonate dehydratase (EC 4.2.1.6)
KEGG: galactonate dehydratase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source D-Galactose (C) -3.7 -13.0 compare
carbon source D-Galactose (C) -3.2 -8.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.6 -2.2 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.6 -2.2 compare
phage P. simiae ORA MOI 0.1 -0.6 -2.2 compare
carbon source L-Arabinose (C) -0.6 -3.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -1.5 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -0.5 -1.8 compare
phage P. simiae OR Antrim MOI 1 -0.5 -2.0 compare
motility inner cut, LB soft agar motility assay -0.5 -2.1 compare
seeds Growth on radish seeds for 72 hours -0.5 -1.9 compare
carbon source D-Mannose (C) -0.5 -3.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.8 compare
phage P. simiae OR Antrim MOI 10 -0.5 -2.2 compare
phage JP1 MOI 1 -0.5 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -1.8 compare
motility inner cut, LB soft agar motility assay +0.6 +2.1 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +0.6 +1.4 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.7 +1.4 compare