Fitness data for PS417_16190 in Pseudomonas simiae WCS417

bile acid:sodium symporter
SEED: Sodium/bile acid symporter family
KEGG: solute carrier family 10 (sodium/bile acid cotransporter), member 7

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.9 -2.0 compare
carbon source 2'-Deoxyinosine 5 mM (C) -0.7 -1.5 compare
soil soil sample 3; outgrowth in LB -0.7 -2.1 compare
carbon source Gly-Glu (C) -0.6 -2.9 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -2.9 compare
phage P. simiae Grant Run MOI 0.1 -0.6 -1.9 compare
phage P. simiae OR1 MOI 0.1 -0.6 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.6 +0.8 compare
motility inner cut, LB soft agar motility assay +0.6 +2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +1.9 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.6 +1.6 compare
stress Aluminum chloride 4 mM +0.6 +3.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6 +1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +1.6 compare
nophagecontrol Only library +0.6 +2.5 compare
phage P. simiae OR Antrim MOI 0.1 +0.7 +2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.7 +2.4 compare
soil soil sample 4; outgrowth in LB +0.7 +2.9 compare