Fitness data for PS417_16180 in Pseudomonas simiae WCS417

MFS transporter
SEED: Sugar efflux transporter SotB
KEGG: MFS transporter, DHA1 family, L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
rhizosphere rhizosphere sample 2; outgrowth in LB -2.5 -2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.3 -2.1 compare
carbon source L-Valine (C) -1.2 -2.6 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.2 -2.4 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol -1.1 -4.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -1.5 compare
soil soil sample 4; outgrowth in LB -0.9 -1.7 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.8 -1.6 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.8 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.7 -1.5 compare
carbon source Carbon source D-Mannitol 5 mM +0.7 +1.7 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.7 +2.7 compare
carbon source Carbon source L-Ornithine 10 mM +0.8 +2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.8 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.8 +2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.9 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +2.0 compare
phage P. simiae Grant Run MOI 0.1 +0.9 +2.2 compare
motility inner cut, LB soft agar motility assay +0.9 +3.0 compare