Fitness data for PS417_15910 in Pseudomonas simiae WCS417

lysine transporter LysE
SEED: Transporter, LysE family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.1 -1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -1.5 compare
seeds Growth on radish seeds for 72 hours -0.9 -1.8 compare
seeds Growth on radish seeds for 24 hours -0.8 -2.0 compare
carbon source D-Trehalose (C) -0.8 -2.4 compare
carbon source Carbon source D-Mannitol 10 mM -0.8 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -1.5 compare
solid stress Fraxetin 3 mM; solid stress -0.7 -1.8 compare
carbon source D-Sorbitol (C) -0.7 -2.5 compare
soil soil sample 6; outgrowth in LB -0.7 -1.7 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.8 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 +2.7 compare
motility outer cut, LB soft agar motility assay +0.8 +2.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +1.0 compare
stress methylglyoxal 0.032 vol% +0.9 +1.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.0 +2.7 compare
seeds Growth on radish seeds for 72 hours +1.0 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.4 +1.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +2.3 +1.4 compare