Fitness data for PS417_15875 in Pseudomonas simiae WCS417

LuxR family transcriptional regulator
SEED: DNA-binding response regulator, LuxR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.2)


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group condition fitness t score  
stress methylglyoxal 0.032 vol% -3.3 -1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.9 -2.3 compare
soil soil sample 5; outgrowth in LB -2.9 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -2.1 -1.9 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.9 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.9 -2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -1.5 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.5 -1.4 compare
liquid stress Fraxetin 3 mM; liquid stress -1.4 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.4 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.3 -1.1 compare
liquid stress Scopoletin 3 mM; liquid stress -1.3 -1.4 compare
carbon source Fumarate (C) -1.3 -2.9 compare
carbon source L-Leucine (C) -1.3 -1.9 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) -1.2 -1.2 compare
carbon source Deoxyribonucleic from herring sperm 5 mg/mL (C) -1.2 -2.2 compare
carbon source Carbon source D-Mannitol 2.5 mM -1.2 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.5 +1.9 compare
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x +1.6 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.7 +1.7 compare