Fitness data for PS417_15650 in Pseudomonas simiae WCS417

glutamine amidotransferase
SEED: ThiJ/PfpI family protein
KEGG: protease I

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
phage P. simiae OR Antrim MOI 10 -3.0 -1.8 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -2.1 -1.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.9 -1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.7 -1.4 compare
phage P. simiae Grant Run MOI 10 -1.7 -1.5 compare
no phage control Time6-nophage -1.6 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.4 -1.9 compare
carbon source L-Valine (C) -1.2 -1.0 compare
stress Chloramphenicol 0.015 mg/ml -1.2 -2.5 compare
phage P. simiae ORA MOI 0.1 -1.2 -1.1 compare
phage Wcs_1 -1.2 -1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.2 -1.1 compare
phage P. simiae OR1 MOI 0.1 -1.1 -1.1 compare
liquid stress 80% Methanol 3 mM; liquid stress +1.1 +2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.1 +1.3 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +1.1 +1.1 compare
carbon source 2'-Deoxyinosine 5 mM (C) +1.1 +1.2 compare
supernatant control Vogels_fungal_media 0.1X +1.2 +2.2 compare
motility outer cut, LB soft agar motility assay +1.3 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.3 +1.0 compare