Fitness data for PS417_01545 in Pseudomonas simiae WCS417

adenine glycosylase
SEED: A/G-specific adenine glycosylase (EC 3.2.2.-)
KEGG: A/G-specific adenine glycosylase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.1 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.1 -2.5 compare
carbon source L-Valine (C) -0.9 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -2.1 compare
phage P. simiae ORA MOI 1 -0.8 -1.9 compare
phage JP1 MOI 10 -0.7 -1.9 compare
seeds Growth on radish seeds for 72 hours -0.7 -2.5 compare
soil soil sample 3; outgrowth in LB -0.7 -2.2 compare
supernatant control Vogels_fungal_media 0.1X -0.7 -1.7 compare
phage JP1 MOI 10 -0.7 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.6 +1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.7 +2.0 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.7 +2.5 compare
phage Wcs_0.1 +0.7 +1.2 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.8 +2.1 compare
carbon source Carbon source D-Mannitol 10 mM +0.8 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.8 +3.2 compare
nitrogen source Putrescine (N) +0.8 +2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.9 +1.3 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +1.5 +1.9 compare