Fitness data for PS417_15485 in Pseudomonas simiae WCS417

amino acid ABC transporter permease
SEED: ABC-type amino acid transport system, permease component
KEGG: polar amino acid transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
supernatant Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -0.6 -1.8 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x -0.5 -2.4 compare
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -0.5 -2.3 compare
soil soil sample 8; outgrowth in LB -0.5 -1.5 compare
motility inner cut, LB soft agar motility assay -0.5 -1.9 compare
motility inner cut, LB soft agar motility assay -0.5 -1.8 compare
exudates RCH2_defined_glucose with Brachypodium distachyon 13-day exudates 1x -0.4 -2.3 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.4 -1.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +0.4 +2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.4 +1.4 compare
stress Choline Lysine 25 mM +0.4 +2.7 compare
phage P. simiae ORA MOI 0.1 +0.4 +1.8 compare
stress Gentamicin 0.008 mg/ml +0.5 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +1.7 compare
liquid stress 80% Methanol 3 mM; liquid stress +0.5 +1.6 compare
phage P. simiae Grant Run MOI 10 +0.5 +2.2 compare
stress Polymyxin B sulfate 0.006 mg/ml +0.5 +2.7 compare
rhizosphere rhizosphere sample 8; outgrowth in LB +0.5 +2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +0.9 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.6 +1.7 compare