Fitness data for PS417_15480 in Pseudomonas simiae WCS417

ABC transporter substrate-binding protein
SEED: ABC transporter amino acid-binding protein
KEGG: polar amino acid transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.2)


Add gene:

Or see all 552 experiments or choose conditions

group condition fitness t score  
soil soil sample 3; outgrowth in LB -3.1 -2.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -2.2 -1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.1 -1.6 compare
phage P. simiae OR Antrim MOI 1 -2.0 -1.6 compare
stress Doxycycline hyclate 0.001 mg/ml -1.9 -2.3 compare
motility_chemotaxis Method=Plug_approach; Chemical=None; Chemical_conc=0mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.9 -2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.7 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.5 -1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.3 -1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -1.3 -2.0 compare
phage Wcs_1 -1.3 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.2 -1.0 compare
stress Phosphomycin 0.001 mg/ml +1.2 +2.9 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +1.2 +1.5 compare
ecofab LB 0.5x in EcoFAB_3.5mL +1.2 +2.3 compare
phage JP1 MOI 1 +1.2 +1.7 compare
agar plate interaction control Taped volatile agar plate with no fungus +1.3 +1.4 compare
soil soil sample 5; outgrowth in LB +1.4 +2.1 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) +1.5 +3.1 compare
carbon source Deoxyribonucleic from herring sperm 5 mg/mL (C) +1.5 +3.0 compare