Fitness data for PS417_15450 in Pseudomonas simiae WCS417

ABC transporter permease
SEED: ABC transporter, permease protein
KEGG: putative spermidine/putrescine transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.3 -3.0 compare
supernatant control Vogels_fungal_media 0.1X -1.3 -2.8 compare
carbon source 2'-Deoxyinosine 5 mM (C) -1.1 -2.8 compare
solid stress Fraxetin 2 mM; solid stress -1.1 -2.4 compare
carbon source L-Valine (C) -0.9 -2.0 compare
solid stress Scopoletin 1 mM; solid stress -0.9 -3.1 compare
carbon source Carbon source D-Mannitol 5 mM -0.8 -2.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -1.6 compare
carbon source L-Histidine (C) -0.8 -2.4 compare
phage P. simiae OR1 MOI 0.1 -0.8 -1.4 compare
solid stress 80% Methanol 3 mM; solid stress -0.7 -4.0 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.7 -2.1 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.7 -1.6 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x +0.7 +2.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.1 compare
exudates RCH2_defined_glucose with Brachypodium distachyon 13-day exudates 1x +0.7 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.0 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x +0.7 +3.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.9 +1.8 compare
root root sample 6; outgrowth in LB +1.1 +1.3 compare