Fitness data for PS417_15420 in Pseudomonas simiae WCS417

hypothetical protein
SEED: transporter, LysE family protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -2.4 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.4 -2.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -1.3 compare
seeds Growth on radish seeds for 24 hours -0.4 -2.1 compare
phage JP1 MOI 10 -0.4 -2.1 compare
soil soil sample 6; outgrowth in LB -0.4 -1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.3 -1.4 compare
solid stress 80% Methanol 0.5 mM; solid stress -0.3 -2.1 compare
rhizosphere rhizosphere sample 2; outgrowth in LB -0.3 -1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.3 -1.3 compare
liquid stress 80% Methanol 3 mM; liquid stress -0.3 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.3 -1.7 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.3 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.4 compare
liquid stress 80% Methanol 3 mM; liquid stress +0.3 +2.1 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels +0.4 +2.5 compare
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.4 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +1.2 compare