Fitness data for PS417_15265 in Pseudomonas simiae WCS417

type VI secretion protein VasK
SEED: IcmF-related protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.3 -1.5 compare
phage P. simiae Grant Run MOI 0.1 +0.3 +2.2 compare
phage P. simiae OR Antrim MOI 1 +0.3 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.3 +2.0 compare
soil soil sample 7; outgrowth in LB +0.3 +1.1 compare
stress Phosphomycin 0.002 mg/ml +0.3 +2.3 compare
stress Phosphomycin 0.001 mg/ml +0.3 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +1.8 compare
seeds Growth on radish seeds for 72 hours +0.4 +2.5 compare
soil soil sample 4; outgrowth in LB +0.4 +1.6 compare
stress LB_noSalt with Chloride 500 mM +0.4 +3.2 compare
root root sample 6; outgrowth in LB +0.4 +1.3 compare
phage P. simiae OR Antrim MOI 0.1 +0.4 +2.9 compare
phage JP1 MOI 1 +0.5 +2.7 compare
phage JP1 MOI 10 +0.5 +2.7 compare
phage JP1 MOI 0.1 +0.5 +3.1 compare
rhizosphere rhizosphere sample 8; outgrowth in LB +0.5 +1.9 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.6 +2.0 compare