Fitness data for PS417_15055 in Pseudomonas simiae WCS417

C4-dicarboxylate ABC transporter
SEED: probable dicarboxylate transporter
KEGG: aerobic C4-dicarboxylate transport protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


Add gene:

Or see all 552 experiments or choose conditions

group condition fitness t score  
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.9 -3.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.6 -1.8 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.5 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -1.9 compare
phage JP1 MOI 0.1 -0.5 -2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -1.5 compare
nophagecontrol Only library -0.4 -1.5 compare
solid stress Fraxetin 2 mM; solid stress -0.4 -2.0 compare
phage P. simiae OR Antrim MOI 0.1 +0.4 +1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +1.3 compare
supernatant control Vogels_fungal_media 0.1X +0.5 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +1.5 compare
stress 2-Furfuraldehyde 0.03 vol% +0.5 +2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.7 compare
stress Gentamicin 0.008 mg/ml +0.5 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.5 +1.2 compare
carbon source L-Valine (C) +0.8 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +1.4 +1.6 compare